< Programme
Sunday 1 September 2024 – Afternoon, 14:00
Session 15. Role of bioinformatics applied to livestock data – Exploiting structural variation and pangenome-based techniques for livestock
Room: Auditorium – Palazzo Congressi Lower Ground Floor
Chair: Pocrnic / Bickhart
Session Type: Theme session
Theatre Session
14:00
Genotyping complex structural variants using a Chicken Pangenome reference
InvitedD. Bickhart, E. Rice, L. Frantz, W. Warren
14:30
Construction of a cattle pangenome for 14 French dairy and beef breeds provides new insights into their genetic diversity
V. Sorin, M. P. Sanchez, C. Iampietro, C. Eché, A. Suin, C. Marcuzzo, L. Drouilhet, D. Milan, G. Tosser-Klopp, C. Donnadieu, C. Gaspin, C. Birbes, C. Klopp, D. Boichard, M. Boussaha
14:45
Construction and characterization of a comprehensive ovine pangenome from 11 breeds provides new insights into their genetic diversity
V. Sorin, C. Birbes, C. Eché, C. Marcuzzo, J. Sarry, A. Suin, C. Donnadieu, C. Gaspin, C. Iampietro, D. Milan, C. Klopp, M. Boussaha, L. Drouilhet, M. P. Sanchez, G. Tosser-Klopp
15:00
Translocations associated with gonadal hypoplasia and colour-sidedness are common in northern Swedish cattle breeds
J. Hinken, T. Vanhala, M. Gòdia, M. Johnsson, A. M. Johansson
15:15
Uncovering functional INDELs leading to alternative splicing in grazing sheep with different immune profiles exposed to gastrointestinal nematode infection
S. Cunha, F. Schenkel, B. Mallard, N. Karrow, Á. Cánovas
15:30
SNP-based identification of Robertsonian translocation 1;29 in 32 Italian cattle breeds
M. Cortellari, A. Bionda, L. Liotta, P. Parma, P. Crepaldi
16:15
Determining differential splice junction usage in the suckling lamb adipose transcriptome by comparing perirenal and tail fat
M. Alonso-García, B. Gutiérrez-Gil, P. A. Fonseca, R. Pelayo, J. J. Arranz, A. Suárez-Vega
16:30
Exploiting WGCNA to analyse the suckling lamb liver transcriptome profiles of males and females
M. Vrcan, A. Suarez-Vega, P. A. S. Fonseca, M. Alonso-García, J. J. Arranz, B. Gutierrez-Gil
16:45
The genotypes of Myostatin gene are associated with weight gain indicators of intensively fattened lambs of Latvian sheep
I. Trapina, S. Plavina, N. Krasnevska, J. Paramonovs, D. Kairisa, N. Paramonova
17:00
Estimating haplotype and mutation effects in the context of genome sequence via ancestral recombination graphs
G. Mafra Fortuna, J. Obšteter, A. Moškrič, G. Gorjanc
17:15
Genomic prediction using functional annotations and QTL features in dairy and beef cattle breeds
P. Croiseau, F. Mollandin, A. Rau, M. P. Sanchez, D. Boichard
17:30
A genome-wide association study to identify novel genomic regions associated for aviary with winter garden usage by laying hens
K. Hoeksema, C. Baes, S. Gebhardt-Henrich, M. Petelle, M. Toscano, B. Makanjuola
17:45
Detecting NGT Products: The Role of the GenEdit Database
F. Debode, V. Gelhay, G. Cartik, A. Granados, E. Clark, H. Mbaya, J. Hulin
Poster Session
15.14
The Genome sequence of the Nguni Sheep, Ovis aries
L. T. Nesengani, S. Mdyogolo, T. Ebenezer, A. Djikeng, T. Masebe, A. Muigai, J. Rees, N. Mapholi
15.15
Whole Genome Sequencing of Aosta cattle to asses breed genomic diversity
F. Bernini, M. Vevey, V. Blanchet, A. Bagnato, M. G. Strillacci
